In silico determination of epitopes recognized by an antibody
The structure of the antibody can be modeled so only the sequences are needed.
The structure of the target has to be solved to ensure the best efficiency of the prediction. The number of times each amino acid is predicted to be in the epitope among the 30 best solutions is calculated and peptides are designed among these amino acids.
For this reason, linear as well as conformational epitopes can be considered for validations.
The peptides are then used to perform cutting-edge techniques of protein-protein interactions.
Materials to provide
Further details on the project may be requested.
You will be able to exchange directly with the experts after filling in the form below.
PDB files of the 30 top-ranked antibody-antigen complexes structures.
Raw and analyzed experimental data.
Complete report with validation methods.
Study following the specifications validated with the Expert.
Get started with your in silico epitope recognition project
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